| Record Information |
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| Version | 1.0 |
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| Creation Date | 2016-09-30 22:38:03 UTC |
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| Update Date | 2020-05-11 20:38:11 UTC |
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| BMDB ID | BMDB0000884 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Ribothymidine |
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| Description | Ribothymidine, also known as 5-methyl-uridine or thymine riboside, belongs to the class of organic compounds known as pyrimidine nucleosides. Pyrimidine nucleosides are compounds comprising a pyrimidine base attached to a ribosyl or deoxyribosyl moiety. Ribothymidine exists as a solid, possibly soluble (in water), and an extremely weak basic (essentially neutral) compound (based on its pKa) molecule. Ribothymidine exists in all living organisms, ranging from bacteria to humans. |
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| Structure | |
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| Synonyms | | Value | Source |
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| 1-(beta-D-Ribofuranosyl)thymine | ChEBI | | Ribosylthymidine | ChEBI | | t | ChEBI | | Thymine riboside | ChEBI | | 1-(b-D-Ribofuranosyl)thymine | Generator | | 1-(Β-D-ribofuranosyl)thymine | Generator | | 1-b-D-Ribofuranosylthymine | HMDB | | 1-beta-delta-Ribofuranosylthymine | HMDB | | 5-Methyl-1-beta-D-ribofuranosyl-2,4(1H,3H)-pyrimidinedione | HMDB | | 5-Methyl-1-beta-delta-ribofuranosyl-2,4(1H,3H)-pyrimidinedione | HMDB | | 5-Methyl-uridine | HMDB | | 5-Methyluridine | HMDB | | b-D-Ribofuranoside thymine-1 | HMDB | | beta-D-Ribofuranoside | HMDB | | beta-delta-Ribofuranoside | HMDB | | beta-delta-Ribofuranoside thymine-1 | HMDB | | Ribosylthymine | HMDB | | Thymine ribofuranoside | HMDB | | Thymine ribonucleoside | HMDB | | Thymine-1 beta-D-ribofuranosylthymine | HMDB | | Thymine-1 beta-delta-ribofuranosylthymine | HMDB |
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| Chemical Formula | C10H14N2O6 |
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| Average Molecular Weight | 258.228 |
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| Monoisotopic Molecular Weight | 258.08518619 |
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| IUPAC Name | 1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-1,2,3,4-tetrahydropyrimidine-2,4-dione |
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| Traditional Name | thymidin |
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| CAS Registry Number | 1463-10-1 |
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| SMILES | CC1=CN([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)C(=O)NC1=O |
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| InChI Identifier | InChI=1S/C10H14N2O6/c1-4-2-12(10(17)11-8(4)16)9-7(15)6(14)5(3-13)18-9/h2,5-7,9,13-15H,3H2,1H3,(H,11,16,17)/t5-,6-,7-,9-/m1/s1 |
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| InChI Key | DWRXFEITVBNRMK-JXOAFFINSA-N |
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| Chemical Taxonomy |
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| Description | belongs to the class of organic compounds known as pyrimidine nucleosides. Pyrimidine nucleosides are compounds comprising a pyrimidine base attached to a ribosyl or deoxyribosyl moiety. |
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| Kingdom | Organic compounds |
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| Super Class | Nucleosides, nucleotides, and analogues |
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| Class | Pyrimidine nucleosides |
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| Sub Class | Not Available |
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| Direct Parent | Pyrimidine nucleosides |
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| Alternative Parents | |
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| Substituents | - Pyrimidine nucleoside
- Glycosyl compound
- N-glycosyl compound
- Pentose monosaccharide
- Pyrimidone
- Hydropyrimidine
- Monosaccharide
- Pyrimidine
- Vinylogous amide
- Tetrahydrofuran
- Heteroaromatic compound
- Urea
- Secondary alcohol
- Lactam
- Organoheterocyclic compound
- Oxacycle
- Azacycle
- Hydrocarbon derivative
- Organopnictogen compound
- Organooxygen compound
- Organonitrogen compound
- Primary alcohol
- Alcohol
- Organic oxygen compound
- Organic oxide
- Organic nitrogen compound
- Aromatic heteromonocyclic compound
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| Molecular Framework | Aromatic heteromonocyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Status | Detected but not Quantified |
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| Origin | |
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| Biofunction | Not Available |
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| Application | Not Available |
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| Cellular locations | |
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| Physical Properties |
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| State | Solid |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | 183 - 187 °C | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| Spectra |
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| Spectra | |
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