Showing Protein Splicing factor U2AF 26 kDa subunit (BMDBP02006)
| Identification | |
|---|---|
| BMDB Protein ID | BMDBP02006 |
| Secondary Accession Numbers | None |
| Name | Splicing factor U2AF 26 kDa subunit |
| Synonyms | Not Available |
| Gene Name | U2AF1L4 |
| Protein Type | Enzyme |
| Biological Properties | |
| General Function | Involved in nucleotide binding |
| Specific Function | RNA-binding protein that function as a pre-mRNA splicing factor. Plays a critical role in both constitutive and enhancer-dependent splicing by mediating protein-protein interactions and protein-RNA interactions required for accurate 3'-splice site selection. Acts by enhancing the binding of U2AF2 to weak pyrimidine tracts. Also participates in the regulation of alternative pre-mRNA splicing. Activates exon 5 skipping of PTPRC during T-cell activation; an event reversed by GFI1. Binds to RNA at the AG dinucleotide at the 3'-splice site (By similarity). Shows a preference for AGC or AGA (By similarity). |
| Pathways | Not Available |
| Reactions | Not Available |
| GO Classification | Not Available |
| Cellular Location | Not Available |
| Gene Properties | |
| Chromosome Location | 18 |
| Locus | Not Available |
| SNPs | U2AF1L4 |
| Gene Sequence |
>663 bp ATGGCTGAATATTTAGCATCGATATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTTT TACTTTAAGATCGGGGCCTGCCGGCACGGGGACCGGTGCTCCCGGCTTCACAACAAGCCG ACTTTCAGCCAGACCATAGTGCTGCTCAACCTGTATCGGAATCCACAGAACACCGCCCAA ACCGCAGACGGATCTCACTGTCACGTGAGCGACGTGGAGGTGCAAGAACACTATGATAAC TTCTTCGAGGAAGTGTTCACCGAACTGCAGGAGAAGTACGGGGAGATTGAAGAGATGAAT GTGTGCGACAACCTGGGGGACCACCTCGTGGGCAATGTTTATGTCAAGTTTCGGCGTGAG GAAGATGCAGAGCGGGCAGTGGTTGAGCTCAATAACCGCTGGTTCAACGGGCAAGCTGTG CATGCTGAGCTGTCTCCCGTCACCGATTTCCGGGAGTCGTGCTGTCGGCAGTATGAGATG GGGGAATGTACCCGCGGTGGTTTCTGCAACTTCATGCACCTGCGACCCATTTCCCGAGAC CTCCGGCGGCAGCTCTACGGGCGGGGACCCAGGCGCAGGTCACCCCCAAGGTCCCATACT GGCCACCGTCCCCGAGAAAGAAATCGACGACGGTCTCCAGACCACCGGCATGGTCGTTTC TGA |
| Protein Properties | |
| Number of Residues | 220 |
| Molecular Weight | 25884.0 |
| Theoretical pI | 8.17 |
| Pfam Domain Function | Not Available |
| Signals |
|
| Transmembrane Regions | Not Available |
| Protein Sequence |
>Splicing factor U2AF 26 kDa subunit MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE EDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD LRRQLYGRGPRRRSPPRSHTGHRPRERNRRRSPDHRHGRF |
| External Links | |
| GenBank ID Protein | AAI02152.1 |
| UniProtKB/Swiss-Prot ID | Q3T127 |
| UniProtKB/Swiss-Prot Entry Name | U2AF4_BOVIN |
| PDB IDs | Not Available |
| GenBank Gene ID | BC102151 |
| GeneCard ID | U2AF1L4 |
| GenAtlas ID | Not Available |
| HGNC ID | Not Available |
| References | |
| General References | Not Available |