Phenotypes
Abortion (embryonic lethality), SNAPC4-related
Charlier et al. (2016): frameshift p.Leu1227Alafs∗134
Abortion (embryonic lethality), TTF1-related
Charlier et al. (2016): nonsense (stop-gain) p.Arg527∗
Cardiomyopathy, dilated — Bovine hereditary cardiomyopathy; Bovine dilated cardiomyopathy
In a segregation analysis of data from a breeding herd, Dolf et al. (1998) provided convincing evidence of autosomal recessive inheritance.
Coat colour, dilution, PMEL-related
Gutiérrez-Gil et al. (2007): c.64G>A Jolly et al. (2008): c.50_52delTTC Laible et al. (2021): "To better adapt dairy cattle to rapidly warming climates, we aimed to lighten their coat color by genome editing. ... Using gRNA/Cas9-mediated editing, we introduced a three bp deletion in the pre-melanosomal protein 17 gene (PMEL) proposed as causative variant for the semi-dominant color dilution phenotype observed in Galloway and Highland cattl...
Coat colour, extension — Black/red coat colour; Haplotype HBR; Haplotype HHR
For information relating to Bos indicus cattle see: OMIA 001199-9915 : Coat colour, extension in Bos indicus
Coat colour, white spotting
See also: OMIA:001737-9913 : Coat colour, white spotting, KIT-related in Bos taurus (taurine cattle)
Dwarfism, primordial disproportionate with craniofacial dysmorphism, PDGFRA-related
Jacinto et al. (2025) investigated a Holstein calf with primordial disproportionate dwarfism and craniofacial dysmorphism using a whole genome sequencing approach: "A heterozygous pathogenic missense variant in exon 12 of PDGFRA [Chr6:g.69749162 T > C; c.1685 T > C; p.Ile562Thr; omia.variant:1841], which replaces residue 562, was found and might be due to a spontaneous de novo mutation. However, due to the lack of parental DNA, we could ...
Epidermolysis bullosa, junctional, ITGA6-related
Boussaha et al. (2023): "Homozygosity mapping followed by analysis of the whole-genome sequences of two [affected Charolais] cases and 5031 control individuals enabled us to prioritize a splice donor site of ITGA6 (c.2160 + 1G > T; Chr2 g.24112740C > A) as the most compelling candidate variant. ... RT-PCR analyses revealed increased retention of introns 14 and 15 of the ITGA6 gene in a heterozygous mutant cow compared with a matched cont...
Haplotype with homozygous deficiency BH24, CPT1C-related
Häfliger et al. (2021) investigated “the two Braunvieh populations reared in Switzerland, the dairy Brown Swiss (BS) and the dual-purpose Original Braunvieh (OB). We performed a genome-wide analysis of array data of trios (sire, dam, and offspring) from the routine genomic selection to identify candidate regions showing missing homozygosity and phenotypic associations with five fertility, ten birth, and nine growth-related traits. In addition,...
Haplotype with homozygous deficiency HH13, KIR2DS1-related
Based on strong evidence obtained in Swiss Holsteins, Häfliger et al (2022) proposed KIR2DS1:p.Gln159* as the likely causal variant for haplotype HH13.