Bovine Metabolome Database: Showing metabocard for Nitric oxide (BMDB0003378)

Identification Taxonomy Physical properties Pathways Spectra Concentrations Links References enzymes (3) Show 3 proteins XML

Record Information

Version

1.0

Creation Date

2016-09-30 23:04:10 UTC

Update Date

2020-06-04 20:47:16 UTC

BMDB ID

BMDB0003378

Secondary Accession Numbers

BMDB03378

Metabolite Identification

Common Name

Nitric oxide

Description

Nitric oxide, also knitric oxidewn as NO or nitric oxide, belongs to the class of initric oxiderganic compounds knitric oxidewn as other nitric oxiden-metal oxides. These are initric oxiderganic compounds containing an oxygen atom of an oxidation state of -2, in which the heaviest atom bonded to the oxygen belongs to the class of 'other nitric oxiden-metals'. Nitric oxide is a drug which is used for the treatment of term and near-term (>34 weeks) neonates with hypoxic respiratory failure. Nitric oxide exists as a solid, possibly soluble (in water), and an extremely weak basic (essentially neutral) compound (based on its pKa) molecule. Nitric oxide exists in all living species, ranging from bacteria to humans. In cattle, nitric oxide is involved in the metabolic pathway called the nitric oxide signaling pathway.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
(NO)(.)	ChEBI
[NO]	ChEBI
EDRF	ChEBI
Endothelium-derived relaxing factor	ChEBI
Mononitrogen monoxide	ChEBI
Monoxido de nitrogeno	ChEBI
Monoxyde d'azote	ChEBI
Nitrogen monooxide	ChEBI
Nitrogen monoxide	ChEBI
Nitrosyl	ChEBI
NO	ChEBI
(.)NO	ChEBI
NO(.)	ChEBI
Oxido de nitrogeno(II)	ChEBI
Oxido nitrico	ChEBI
Oxyde azotique	ChEBI
Oxyde nitrique	ChEBI
Stickstoff(II)-oxid	ChEBI
Stickstoffmonoxid	ChEBI
INOmax	Kegg
Nitrogen oxide	HMDB
Nitrogen protoxide	HMDB
Nitrosyl hydride	HMDB
Nitrosyl radical	HMDB
Nitroxide radical	HMDB
Nitroxyl	HMDB
Endogenous nitrate vasodilator	MeSH, HMDB
Monoxide, nitrogen	MeSH, HMDB
Nitric oxide, endothelium derived	MeSH, HMDB
Nitric oxide, endothelium-derived	MeSH, HMDB
Monoxide, mononitrogen	MeSH, HMDB
Vasodilator, endogenous nitrate	MeSH, HMDB
Endothelium-derived nitric oxide	MeSH, HMDB
Nitrate vasodilator, endogenous	MeSH, HMDB
Oxide, nitric	MeSH, HMDB

Chemical Formula

Average Molecular Weight

30.0061

Monoisotopic Molecular Weight

29.997988627

IUPAC Name

nitroso

Traditional Name

nitric oxide

CAS Registry Number

10102-43-9

SMILES

[N]=O

InChI Identifier

InChI=1S/NO/c1-2

InChI Key

MWUXSHHQAYIFBG-UHFFFAOYSA-N

Chemical Taxonomy

Description

belongs to the class of inorganic compounds known as other non-metal oxides. These are inorganic compounds containing an oxygen atom of an oxidation state of -2, in which the heaviest atom bonded to the oxygen belongs to the class of 'other non-metals'.

Kingdom

Inorganic compounds

Super Class

Homogeneous non-metal compounds

Class

Other non-metal organides

Sub Class

Other non-metal oxides

Direct Parent

Other non-metal oxides

Alternative Parents

Inorganic oxides

Substituents

Other non-metal oxide
Inorganic oxide

Molecular Framework

Not Available

External Descriptors

reactive nitrogen species (CHEBI:16480 )
reactive oxygen species (CHEBI:16480 )
nitrogen oxide (CHEBI:16480 )
inorganic radical (CHEBI:16480 )

Ontology

Status

Detected and Quantified

Origin

Endogenous

Biofunction

Not Available

Application

Not Available

Cellular locations

Cytoplasm
Myelin sheath

Physical Properties

State

Liquid

Experimental Properties

Property	Value	Reference
Melting Point	-163.6 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.35	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	34.14 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	2.89 m³·mol⁻¹	ChemAxon
Polarizability	1.69 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	splash10-001i-9000000000-d182bfca83d886821e6d	View in MoNA
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	Not Available	View in JSpectraViewer
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-001i-9000000000-8a2dd9da1fc114d013b3	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-001i-9000000000-8a2dd9da1fc114d013b3	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-001i-9000000000-8a2dd9da1fc114d013b3	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-004i-9000000000-e998110984a05853a05d	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-004i-9000000000-e998110984a05853a05d	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-004i-9000000000-e998110984a05853a05d	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-001i-9000000000-4faa0e3c79683567bab0	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-001i-9000000000-4faa0e3c79683567bab0	View in MoNA
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-001i-9000000000-4faa0e3c79683567bab0	View in MoNA

Biological Properties

Cellular Locations

Cytoplasm
Myelin sheath

Biospecimen Locations

Adipose Tissue
Adrenal Gland
Adrenal Medulla
Bladder
Brain
Epidermis
Fibroblasts
Intestine
Kidney
Lung
Milk
Neuron
Pancreas
Placenta
Platelet
Prostate Tissue
Skeletal Muscle
Spleen
Testis
Thyroid Gland

Pathways

Name	SMPDB/Pathwhiz	KEGG
Arginine and Proline Metabolism		Not Available
Nitric Oxide Signaling Pathway		Not Available
Ion Channels and Their Functional Role in Vascular Endothelium		Not Available
Succinate Signalling During Inflammation		Not Available
Succinate Signalling		Not Available

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Adipose Tissue	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Adrenal Gland	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Adrenal Medulla	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Bladder	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Brain	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Epidermis	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Fibroblasts	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Intestine	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Kidney	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Lung	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Milk	Detected and Quantified	3.96 uM	Not Specified	Not Specified	Normal	PMID: 20132956	details
Milk	Detected and Quantified	8.89 uM	Not Specified	Not Specified	Normal	PMID: 20132956	details
Neuron	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Pancreas	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Placenta	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Platelet	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Prostate Tissue	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Skeletal Muscle	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Spleen	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Testis	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details
Thyroid Gland	Expected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	Not Applicable	details

Abnormal Concentrations

Not Available

External Links

HMDB ID

HMDB0032439

DrugBank ID

DB00435

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

127983

KEGG Compound ID

C00533

BioCyc ID

NITRIC-OXIDE

BiGG ID

Not Available

Wikipedia Link

Nitric oxide

METLIN ID

Not Available

PubChem Compound

145068

PDB ID

Not Available

ChEBI ID

16480

References

Synthesis Reference

Morabito, Paul; Heicklen, Julian. Disproportionation to combination ratios of alkoxy radicals with nitric oxide. Journal of Physical Chemistry (1985), 89(13), 2914-16.

Material Safety Data Sheet (MSDS)

Not Available

General References

Atakisi O, Oral H, Atakisi E, Merhan O, Metin Pancarci S, Ozcan A, Marasli S, Polat B, Colak A, Kaya S: Subclinical mastitis causes alterations in nitric oxide, total oxidant and antioxidant capacity in cow milk. Res Vet Sci. 2010 Aug;89(1):10-3. doi: 10.1016/j.rvsc.2010.01.008. Epub 2010 Feb 4. [PubMed:20132956 ]

Enzymes

Enzyme Details

1. Nitric oxide synthase, endothelial

General function:: Inorganic ion transport and metabolism
Specific function:: Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets.
Gene Name:: NOS3
Uniprot ID:: P29473
Molecular weight:: 133287.0

Reactions

2 L-Arginine + 3 NADPH + 4 Oxygen →2 N-(o)-Hydroxyarginine +2 Nitric oxide +3 NADP +4 Water	details

Enzyme Details

2. Ferrochelatase, mitochondrial

General function:: Coenzyme transport and metabolism
Specific function:: Catalyzes the ferrous insertion into protoporphyrin IX.
Gene Name:: FECH
Uniprot ID:: P22600
Molecular weight:: 46935.0

Enzyme Details

3. Nitric oxide synthase, inducible

General function:: Inorganic ion transport and metabolism
Specific function:: Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. In macrophages, NO mediates tumoricidal and bactericidal actions. Also has nitrosylase activity and mediates cysteine S-nitrosylation of cytoplasmic target proteins such PTGS2/COX2. As component of the iNOS-S100A8/9 transnitrosylase complex involved in the selective inflammatory stimulus-dependent S-nitrosylation of GAPDH implicated in regulation of the GAIT complex activity and probably multiple targets including ANXA5, EZR, MSN and VIM. Involved in inflammation, enhances the synthesis of proinflammatory mediators such as IL6 and IL8.
Gene Name:: NOS2
Uniprot ID:: Q27995
Molecular weight:: 131208.0

Showing metabocard for Nitric oxide (BMDB0003378)

Structure for BMDB0003378 (Nitric oxide)

Enzymes

Reactions